PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kalax.0192s0035.1.p
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family WRKY
Protein Properties Length: 350aa    MW: 38925.9 Da    PI: 6.7
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kalax.0192s0035.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY87.98.7e-28114175159
                          ---SS-EEEEEEE--TT-SS-EEEEEE-ST...T---EEEEEE-SSSTTEEEEEEES--SS- CS
                 WRKY   1 ldDgynWrKYGqKevkgsefprsYYrCtsa...gCpvkkkversaedpkvveitYegeHnhe 59 
                          ldDg++WrKYGqK++ g+ +pr+YYrCt++   gC ++k+v+rs++dp+++++tY+g+H+++
  Kalax.0192s0035.1.p 114 LDDGHSWRKYGQKDILGAIHPRGYYRCTHRhvqGCLATKQVQRSDQDPTIFHVTYRGQHTCT 175
                          59***************************99999**************************97 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.20.25.802.5E-28105176IPR003657WRKY domain
PROSITE profilePS5081122.676109172IPR003657WRKY domain
SuperFamilySSF1182902.62E-25113175IPR003657WRKY domain
SMARTSM007741.1E-39114176IPR003657WRKY domain
PfamPF031065.4E-26115174IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 350 aa     Download sequence    Send to blast
MEANSPAWEQ QALINELKQG RELAKQLQNH LNPSTASSET RLFLVQKIIS SYEKTLTKLN  60
PSNNSSKNNN SPRSQGSSHQ HYSTHQDASK KRKAMPKWTE QVQVKSETGL ESPLDDGHSW  120
RKYGQKDILG AIHPRGYYRC THRHVQGCLA TKQVQRSDQD PTIFHVTYRG QHTCTKSANS  180
SPNKPSEQQK RRKTDHTSDQ LRFSFGVKNE ERSPLEEQVF PTFSSFPSTS SGNKPDDYVF  240
MSTSAAEAET EDQFIMCAAE ASSFSPLYIS SATSDTDFYP PCHVPGGLGL SHLNVQISEF  300
EAAGSCLNFG TNSPMGVLDL DLDFPVRSAT STTAMDFDSS FPFGFLDYD*
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_002320852.24e-86hypothetical protein POPTR_0014s09190g
SwissprotQ9SUP63e-50WRK53_ARATH; Probable WRKY transcription factor 53
TrEMBLB9I8V94e-86B9I8V9_POPTR; Uncharacterized protein
STRINGPOPTR_0014s09190.11e-85(Populus trichocarpa)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G23810.17e-47WRKY family protein